Part:BBa_K176029
Repressible AHL->GFP Receiver: PoPS->tetR+pCon 0.70->luxR+pLux/Tet->GFP
Repressible AHL->GFP Receiver
Input PoPS represses GFP.
Input AHL activates GFP.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 797
Illegal NheI site found at 820 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1775
Illegal BsaI.rc site found at 2519
MEASUREMENT
By ligating the device( K176029 ) after some definite constitutive promoter, we can exam the response of the hybrid promoter to both AHL and aTc. Here the tetR part is attached LVA. INPUT : AHL, aTc DEVICE: K176078( J23109 + K176029) OUTPUT: GFP
data
K176078
T(min) | NUMBER | AHL(M) | ATC(ng/ml) | FLU(arbitrary) | OD600 | FLU/OD600 | ST.FLU/OD600(ustc_st1) |
0 | 1 | 0.00E+00 | 0 | 0.094 | 0.087 | 1.08045977 | 4.318902227 |
0 | 2 | 1.00E-06 | 0 | 0.112 | 0.086333333 | 1.297297297 | 5.185662938 |
0 | 3 | 1.00E-06 | 0.001 | 0.060333333 | 0.090666667 | 0.665441176 | 2.659955936 |
0 | 4 | 1.00E-06 | 0.01 | 0.087 | 0.094666667 | 0.919014085 | 3.673558318 |
0 | 5 | 1.00E-06 | 0.1 | 0.022666667 | 0.099 | 0.228956229 | 0.915202578 |
0 | 6 | 1.00E-06 | 1 | 0.038666667 | 0.099666667 | 0.387959866 | 1.550784931 |
0 | 7 | 1.00E-04 | 0 | 0.211333333 | 0.107333333 | 1.968944099 | 7.870424509 |
0 | 8 | 1.00E-04 | 0.001 | 0.120666667 | 0.108 | 1.117283951 | 4.466098855 |
0 | 9 | 1.00E-04 | 0.01 | 0.057666667 | 0.107 | 0.53894081 | 2.154298317 |
0 | 10 | 1.00E-04 | 0.1 | 0.044 | 0.106 | 0.41509434 | 1.659249069 |
0 | 11 | 1.00E-04 | 1 | 0.024 | 0.109 | 0.220183486 | 0.880135453 |
120 | 1 | 0.00E+00 | 0 | 0.930666667 | 0.263 | 3.538656527 | 14.1450075 |
120 | 2 | 1.00E-06 | 0 | 0.910333333 | 0.282666667 | 3.220518868 | 12.87332161 |
120 | 3 | 1.00E-06 | 0.001 | 91.18233333 | 0.268666667 | 339.3883375 | 1356.630841 |
120 | 4 | 1.00E-06 | 0.01 | 102.1966667 | 0.282333333 | 361.9716647 | 1446.902765 |
120 | 5 | 1.00E-06 | 0.1 | 87.97266667 | 0.267666667 | 328.6650062 | 1313.766664 |
120 | 6 | 1.00E-06 | 1 | 6.056666667 | 0.106333333 | 56.95924765 | 227.6821667 |
120 | 7 | 1.00E-04 | 0 | 5.871333333 | 0.282666667 | 20.77122642 | 83.02844632 |
120 | 8 | 1.00E-04 | 0.001 | 140.8833333 | 0.27 | 521.7901235 | 2085.742189 |
120 | 9 | 1.00E-04 | 0.01 | 153.5733333 | 0.261 | 588.403576 | 2352.014934 |
120 | 10 | 1.00E-04 | 0.1 | 148.3833333 | 0.256 | 579.6223958 | 2316.914082 |
120 | 11 | 1.00E-04 | 1 | 23.95366667 | 0.123333333 | 194.2189189 | 776.3477592 |
300 | 1 | 0.00E+00 | 0 | 3.509666667 | 1.016 | 3.454396325 | 13.80819573 |
300 | 2 | 1.00E-06 | 0 | 7.015333333 | 0.937 | 7.487015297 | 29.92771035 |
300 | 3 | 1.00E-06 | 0.001 | 501.98 | 0.872666667 | 575.2253629 | 2299.337902 |
300 | 4 | 1.00E-06 | 0.01 | 632.6 | 0.921 | 686.8621064 | 2745.58143 |
300 | 5 | 1.00E-06 | 0.1 | 543.6 | 0.839333333 | 647.6568705 | 2588.867053 |
300 | 6 | 1.00E-06 | 1 | 60.689 | 0.178333333 | 340.3121495 | 1360.323578 |
300 | 7 | 1.00E-04 | 0 | 29.55633333 | 0.878 | 33.66324981 | 134.5614974 |
300 | 8 | 1.00E-04 | 0.001 | 910.6966667 | 0.845 | 1077.747535 | 4308.060657 |
300 | 9 | 1.00E-04 | 0.01 | 1009 | 0.833333333 | 1210.8 | 4839.908862 |
300 | 10 | 1.00E-04 | 0.1 | 1013.7 | 0.826666667 | 1226.25 | 4901.666867 |
300 | 11 | 1.00E-04 | 1 | 171.3966667 | 0.188 | 911.6843972 | 3644.259492 |
For the details of the definition of ST.FLU and the unit ustc_st1, please click here.
plot
conditions | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
AHL/M | 0.00E+00 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-04 | 1.00E-04 | 1.00E-04 | 1.00E-04 | 1.00E-04 |
Atc/(ng/ml) | 0 | 0 | 2 | 20 | 200 | 2000 | 0 | 2 | 20 | 200 | 2000 |
protocols
aTc,AHLHybrid promoter: BBa_K176070, BBa_K176071, BBa_K176075, BBa_K176078:
1. Streak a plate of the strain which contain one of the parts listed in pSB1A3 .
2. Inoculate two 3ml cultures of supplemented M9 Medium and antibiotic(Ampicillin 0.1mg/ml) with single colony from the plate.
3. Cultures were grown in test tubes(BIO BASIC INC.12ml Polypropylene Round-bottom Culture Tubes With Graduations And Dual Cap Cat.No:TD444) for 16hrs at 37℃ with shaking at 200rpm..
4. Cultures were diluted 1:1000 to 11 tubes 3ml fresh medium and grown for 4.5hrs.
5. Stock concentration of the cognate AHL, 3-oxohexanoyl-homoserine and aTc (anhydrotetracycline) are diluted and added to different tube to get different final concentration listed in the table below:
Tube No. | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
c(AHL)/M | 0 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-06 | 1.00E-04 | 1.00E-04 | 1.00E-04 | 1.00E-04 | 1.00E-04 |
C(Atc)/ng/ml | 0 | 0 | 2 | 20 | 200 | 2000 | 0 | 2 | 20 | 200 | 2000 |
To ensure the same response time , the AHL and aTc should be added with a time interval of 2mins between tubes, so do the measurements procedure.
7. Measure the fluorescence(SHIMDZU SPECTROFLUOROPHOTOMETER RF-5301PC, 250ul quartz cell path length 10mm,501 nm excitation,514 nm emission,1.5nm slit width) and absorbance ((HITACHI UV-VIS spectrophotometer U-2810 ,200ul quartz cell path length 10mm,600nm,1.5 nm slit width) for the first time 30 minutes after adding AHL and aTc. Repeat measurement several hours a time until OD600 reach to 0.8,it will take about 7hours in average.
None |